HL_7M4W_107
3D structure
- PDB id
- 7M4W (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- A. baumannii Ribosome-Eravacycline complex: 70S Empty
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.55 Å
Loop
- Sequence
- AUCCCUUCCCGAACU
- Length
- 15 nucleotides
- Bulged bases
- 7M4W|1|B|C|39
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7M4W_107 not in the Motif Atlas
- Homologous match to HL_4V9F_074
- Geometric discrepancy: 0.1706
- The information below is about HL_4V9F_074
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_97756.2
- Basepair signature
- cWW-cSH-cWS-F-tSW-cSW-F-cWW-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
7M4W|1|B|A|32
7M4W|1|B|U|33
7M4W|1|B|C|34
7M4W|1|B|C|35
7M4W|1|B|C|36
7M4W|1|B|U|37
7M4W|1|B|U|38
7M4W|1|B|C|39
7M4W|1|B|C|40
7M4W|1|B|C|41
7M4W|1|B|G|42
7M4W|1|B|A|43
7M4W|1|B|A|44
7M4W|1|B|C|45
7M4W|1|B|U|46
Current chains
- Chain B
- 5s ribosomal RNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain F
- 50S ribosomal protein L5
- Chain N
- 50S ribosomal protein L18
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