HL_7M4X_016

3D structure

PDB id

7M4X (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-Eravacycline complex: 70S with P-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.66 Å

Loop

Sequence

CUUCGUG

Length

7 nucleotides

Bulged bases

7M4X|1|A|U|544, 7M4X|1|A|U|547

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7M4X_016 not in the Motif Atlas

Geometric match to HL_5U3G_001

Geometric discrepancy: 0.281

The information below is about HL_5U3G_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.8

Basepair signature

cWW-F

Number of instances in this motif group

23

Unit IDs

7M4X|1|A|C|542
7M4X|1|A|U|543
7M4X|1|A|U|544
7M4X|1|A|C|545
7M4X|1|A|G|546
7M4X|1|A|U|547
7M4X|1|A|G|548

Current chains

Chain A

23s ribosomal RNA

Nearby chains

Chain I

50S ribosomal protein L13

Chain Q

50S ribosomal protein L21