HL_7M5D_038

3D structure

PDB id

7M5D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a non-rotated E.coli 70S ribosome in complex with RF3-GTP, RF1 and P-tRNA (state I)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

7M5D|1|1|A|1535

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7M5D_038 not in the Motif Atlas

Geometric match to HL_3U4M_001

Geometric discrepancy: 0.1698

The information below is about HL_3U4M_001

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.2

Basepair signature

cWW-tSW-F

Number of instances in this motif group

60

Unit IDs

7M5D|1|1|C|1533
7M5D|1|1|U|1534
7M5D|1|1|A|1535
7M5D|1|1|C|1536
7M5D|1|1|G|1537
7M5D|1|1|G|1538

Current chains

Chain 1

23S ribosomal RNA

Nearby chains