HL_7M5D_080

3D structure

PDB id

7M5D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a non-rotated E.coli 70S ribosome in complex with RF3-GTP, RF1 and P-tRNA (state I)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

7M5D|1|2|U|421

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7M5D_080 not in the Motif Atlas

Homologous match to HL_4LFB_011

Geometric discrepancy: 0.11

The information below is about HL_4LFB_011

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

7M5D|1|2|C|419
7M5D|1|2|U|420
7M5D|1|2|U|421
7M5D|1|2|C|422
7M5D|1|2|G|423
7M5D|1|2|G|424

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain h

30S ribosomal protein S3

Chain i

30S ribosomal protein S4