HL_7M5D_101
3D structure
- PDB id
- 7M5D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a non-rotated E.coli 70S ribosome in complex with RF3-GTP, RF1 and P-tRNA (state I)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- CAUGCCG
- Length
- 7 nucleotides
- Bulged bases
- 7M5D|1|3|G|41
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7M5D_101 not in the Motif Atlas
- Homologous match to HL_5J7L_203
- Geometric discrepancy: 0.1163
- The information below is about HL_5J7L_203
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_47787.2
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 10
Unit IDs
7M5D|1|3|C|38
7M5D|1|3|A|39
7M5D|1|3|U|40
7M5D|1|3|G|41
7M5D|1|3|C|42
7M5D|1|3|C|43
7M5D|1|3|G|44
Current chains
- Chain 3
- 5S ribosomal RNA
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain E
- 50S ribosomal protein L5
- Chain O
- 50S ribosomal protein L18
- Chain a
- 50S ribosomal protein L31
Coloring options: