HL_7M5D_111

3D structure

PDB id

7M5D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a non-rotated E.coli 70S ribosome in complex with RF3-GTP, RF1 and P-tRNA (state I)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

CGCCAG

Length

6 nucleotides

Bulged bases

7M5D|1|1|C|2145

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7M5D_111 not in the Motif Atlas

Homologous match to HL_3U4M_001

Geometric discrepancy: 0.3593

The information below is about HL_3U4M_001

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

7M5D|1|1|C|2143
7M5D|1|1|G|2144
7M5D|1|1|C|2145
7M5D|1|1|C|2146
7M5D|1|1|A|2147
7M5D|1|1|G|2148

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain p

30S ribosomal protein S11