HL_7MD7_129

3D structure

PDB id

7MD7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with triphenylphosphonium analog of chloramphenicol CAM-C4-TPP and protein Y (YfiA) at 2.80A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GCCCACCAGC

Length

10 nucleotides

Bulged bases

7MD7|1|2A|C|888

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7MD7|1|2A|G|883
7MD7|1|2A|C|884
7MD7|1|2A|C|885
7MD7|1|2A|C|886
7MD7|1|2A|A|887
7MD7|1|2A|C|888
7MD7|1|2A|C|889
7MD7|1|2A|A|890
7MD7|1|2A|G|892
7MD7|1|2A|C|893

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 2m

30S ribosomal protein S13