HL_7MDZ_086

3D structure

PDB id

7MDZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S rabbit ribosome stalled with benzamide-CHX

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GUCGCCGUGCC

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7MDZ|1|9|G|377
7MDZ|1|9|U|378
7MDZ|1|9|C|379
7MDZ|1|9|G|380
7MDZ|1|9|C|381
7MDZ|1|9|C|382
7MDZ|1|9|G|383
7MDZ|1|9|U|384
7MDZ|1|9|G|385
7MDZ|1|9|C|386
7MDZ|1|9|C|387

Current chains

Chain 9

18S rRNA

Nearby chains

Chain II

eS8

Chain LL

uS17