HL_7MPJ_028
3D structure
- PDB id
- 7MPJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Stm1 bound vacant 80S structure isolated from nop1-D243A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GUGUAACAAC
- Length
- 10 nucleotides
- Bulged bases
- 7MPJ|1|A1|U|1267, 7MPJ|1|A1|U|1269, 7MPJ|1|A1|A|1271, 7MPJ|1|A1|C|1272, 7MPJ|1|A1|A|1273, 7MPJ|1|A1|A|1274
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7MPJ|1|A1|G|1266
7MPJ|1|A1|U|1267
7MPJ|1|A1|G|1268
7MPJ|1|A1|U|1269
7MPJ|1|A1|A|1270
7MPJ|1|A1|A|1271
7MPJ|1|A1|C|1272
7MPJ|1|A1|A|1273
7MPJ|1|A1|A|1274
7MPJ|1|A1|C|1275
Current chains
- Chain A1
- 25S rRNA
Nearby chains
No other chains within 10ÅColoring options: