HL_7MPJ_081

3D structure

PDB id

7MPJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Stm1 bound vacant 80S structure isolated from nop1-D243A

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CGACCCUUUGGAAG

Length

14 nucleotides

Bulged bases

7MPJ|1|B5|C|191, 7MPJ|1|B5|U|192, 7MPJ|1|B5|U|193, 7MPJ|1|B5|U|194

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7MPJ|1|B5|C|186
7MPJ|1|B5|G|187
7MPJ|1|B5|A|188
7MPJ|1|B5|C|189
7MPJ|1|B5|C|190
7MPJ|1|B5|C|191
7MPJ|1|B5|U|192
7MPJ|1|B5|U|193
7MPJ|1|B5|U|194
7MPJ|1|B5|G|195
7MPJ|1|B5|G|196
7MPJ|1|B5|A|197
7MPJ|1|B5|A|198
7MPJ|1|B5|G|199

Current chains

Chain B5

18S rRNA

Nearby chains

Chain BI

40S ribosomal protein S8-A