HL_7MPJ_088

3D structure

PDB id

7MPJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Stm1 bound vacant 80S structure isolated from nop1-D243A

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CAU(OMC)CAAGG(A2M)AG

Length

12 nucleotides

Bulged bases

7MPJ|1|B5|A|416

QA status

Modified nucleotides: OMC, A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7MPJ|1|B5|C|411
7MPJ|1|B5|A|412
7MPJ|1|B5|U|413
7MPJ|1|B5|OMC|414
7MPJ|1|B5|C|415
7MPJ|1|B5|A|416
7MPJ|1|B5|A|417
7MPJ|1|B5|G|418
7MPJ|1|B5|G|419
7MPJ|1|B5|A2M|420
7MPJ|1|B5|A|421
7MPJ|1|B5|G|422

Current chains

Chain B5

18S rRNA

Nearby chains

Chain AV

60S ribosomal protein L23-A

Chain BG

40S ribosomal protein S6-A