HL_7MPJ_117

3D structure

PDB id

7MPJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Stm1 bound vacant 80S structure isolated from nop1-D243A

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

AGUAACUA(PSU)GAC(PSU)

Length

13 nucleotides

Bulged bases

7MPJ|1|A1|A|2256

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7MPJ|1|A1|A|2252
7MPJ|1|A1|G|2253
7MPJ|1|A1|U|2254
7MPJ|1|A1|A|2255
7MPJ|1|A1|A|2256
7MPJ|1|A1|C|2257
7MPJ|1|A1|U|2258
7MPJ|1|A1|A|2259
7MPJ|1|A1|PSU|2260
7MPJ|1|A1|G|2261
7MPJ|1|A1|A|2262
7MPJ|1|A1|C|2263
7MPJ|1|A1|PSU|2264

Current chains

Chain A1

25S rRNA

Nearby chains

Chain B5

Small subunit ribosomal RNA; SSU rRNA