HL_7MQA_005

3D structure

PDB id

7MQA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human SSU processome, state post-A1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CCCCG

Length

5 nucleotides

Bulged bases

7MQA|1|L1|C|324

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7MQA_005 not in the Motif Atlas

Homologous match to HL_4V88_192

Geometric discrepancy: 0.2099

The information below is about HL_4V88_192

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_43793.1

Basepair signature

cWW-F

Number of instances in this motif group

50

Unit IDs

7MQA|1|L1|C|323
7MQA|1|L1|C|324
7MQA|1|L1|C|325
7MQA|1|L1|C|326
7MQA|1|L1|G|327

Current chains

Chain L1

18S rRNA

Nearby chains