3D structure

PDB id
7MSC (explore in PDB, NAKB, or RNA 3D Hub)
Description
Mtb 70SIC in complex with MtbEttA at Pre_R0 state
Experimental method
ELECTRON MICROSCOPY
Resolution
2.97 Å

Loop

Sequence
GUUGAUAUUC
Length
10 nucleotides
Bulged bases
7MSC|1|A|U|1527, 7MSC|1|A|U|1528
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7MSC_036 not in the Motif Atlas
Homologous match to HL_5J7L_168
Geometric discrepancy: 0.1427
The information below is about HL_5J7L_168
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_81545.2
Basepair signature
cWW-tWH-F-F-F-F
Number of instances in this motif group
7

Unit IDs

7MSC|1|A|G|1520
7MSC|1|A|U|1521
7MSC|1|A|U|1522
7MSC|1|A|G|1523
7MSC|1|A|A|1524
7MSC|1|A|U|1525
7MSC|1|A|A|1526
7MSC|1|A|U|1527
7MSC|1|A|U|1528
7MSC|1|A|C|1529

Current chains

Chain A
23S rRNA

Nearby chains

Chain T
50S ribosomal protein L23

Coloring options:


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