HL_7MSC_107
3D structure
- PDB id
- 7MSC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mtb 70SIC in complex with MtbEttA at Pre_R0 state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.97 Å
Loop
- Sequence
- GUUCAAAUC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7MSC_107 not in the Motif Atlas
- Homologous match to HL_5AXM_003
- Geometric discrepancy: 0.1118
- The information below is about HL_5AXM_003
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_28252.8
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 140
Unit IDs
7MSC|1|y|G|54
7MSC|1|y|U|55
7MSC|1|y|U|56
7MSC|1|y|C|57
7MSC|1|y|A|58
7MSC|1|y|A|59
7MSC|1|y|A|60
7MSC|1|y|U|61
7MSC|1|y|C|62
Current chains
- Chain y
- initiator tRNA (Met)
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain F
- 50S ribosomal protein L5
- Chain x
- Energy-dependent translational throttle protein EttA
Coloring options: