HL_7MSH_003

3D structure

PDB id

7MSH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Pre_R1 state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.23 Å

Loop

Sequence

AGUGAUGU

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7MSH_003 not in the Motif Atlas

Homologous match to HL_4WF9_004

Geometric discrepancy: 0.1935

The information below is about HL_4WF9_004

Detailed Annotation

GNRA with tandem sheared

Broad Annotation

No text annotation

Motif group

HL_98423.4

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

16

Unit IDs

7MSH|1|A|A|137
7MSH|1|A|G|138
7MSH|1|A|U|139
7MSH|1|A|G|140
7MSH|1|A|A|141
7MSH|1|A|U|142
7MSH|1|A|G|143
7MSH|1|A|U|144

Current chains

Chain A

23S rRNA

Nearby chains

Chain T

50S ribosomal protein L23