HL_7MSH_028

3D structure

PDB id

7MSH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Pre_R1 state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.23 Å

Loop

Sequence

GGAUAAGC

Length

8 nucleotides

Bulged bases

7MSH|1|A|U|1086, 7MSH|1|A|G|1089

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7MSH_028 not in the Motif Atlas

Homologous match to HL_7A0S_026

Geometric discrepancy: 0.1475

The information below is about HL_7A0S_026

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.5

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

428

Unit IDs

7MSH|1|A|G|1083
7MSH|1|A|G|1084
7MSH|1|A|A|1085
7MSH|1|A|U|1086
7MSH|1|A|A|1087
7MSH|1|A|A|1088
7MSH|1|A|G|1089
7MSH|1|A|C|1090

Current chains

Chain A

23S rRNA

Nearby chains

Chain 7

50S ribosomal protein L37

Chain M

50S ribosomal protein L16