HL_7MSH_036

3D structure

PDB id

7MSH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Pre_R1 state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.23 Å

Loop

Sequence

GUUGAUAUUC

Length

10 nucleotides

Bulged bases

7MSH|1|A|U|1527, 7MSH|1|A|U|1528

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7MSH_036 not in the Motif Atlas

Homologous match to HL_4WF9_035

Geometric discrepancy: 0.1826

The information below is about HL_4WF9_035

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_77449.2

Basepair signature

cWW-tWH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

7MSH|1|A|G|1520
7MSH|1|A|U|1521
7MSH|1|A|U|1522
7MSH|1|A|G|1523
7MSH|1|A|A|1524
7MSH|1|A|U|1525
7MSH|1|A|A|1526
7MSH|1|A|U|1527
7MSH|1|A|U|1528
7MSH|1|A|C|1529

Current chains

Chain A

23S rRNA

Nearby chains

Chain T

50S ribosomal protein L23