HL_7MSH_099

3D structure

PDB id

7MSH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Pre_R1 state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.23 Å

Loop

Sequence

GGUCAAC

Length

7 nucleotides

Bulged bases

7MSH|1|a|U|1159, 7MSH|1|a|C|1160

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7MSH_099 not in the Motif Atlas

Homologous match to HL_4LFB_027

Geometric discrepancy: 0.3383

The information below is about HL_4LFB_027

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.5

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

428

Unit IDs

7MSH|1|a|G|1157
7MSH|1|a|G|1158
7MSH|1|a|U|1159
7MSH|1|a|C|1160
7MSH|1|a|A|1161
7MSH|1|a|A|1162
7MSH|1|a|C|1163

Current chains

Chain a

16S rRNA

Nearby chains