HL_7MSH_117

3D structure

PDB id

7MSH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Pre_R1 state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.23 Å

Loop

Sequence

CAGUAAUG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7MSH_117 not in the Motif Atlas

Geometric match to HL_3RG5_006

Geometric discrepancy: 0.2795

The information below is about HL_3RG5_006

Detailed Annotation

tRNA anticodon loop

Broad Annotation

tRNA anticodon loop

Motif group

HL_87268.3

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

16

Unit IDs

7MSH|1|A|C|3090
7MSH|1|A|A|3091
7MSH|1|A|G|3092
7MSH|1|A|U|3093
7MSH|1|A|A|3094
7MSH|1|A|A|3095
7MSH|1|A|U|3096
7MSH|1|A|G|3097

Current chains

Chain A

23S rRNA

Nearby chains

Chain P

50S ribosomal protein L19