HL_7MT3_010

3D structure

PDB id

7MT3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70S with P/E tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

CUGGGAUG

Length

8 nucleotides

Bulged bases

7MT3|1|A|U|394

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7MT3_010 not in the Motif Atlas

Homologous match to HL_5J7L_142

Geometric discrepancy: 0.1322

The information below is about HL_5J7L_142

Detailed Annotation

T-loop with 2 stacked bulged bases

Broad Annotation

T-loop

Motif group

HL_01609.3

Basepair signature

cWW-tWH-F-F-F

Number of instances in this motif group

18

Unit IDs

7MT3|1|A|C|388
7MT3|1|A|U|389
7MT3|1|A|G|390
7MT3|1|A|G|391
7MT3|1|A|G|392
7MT3|1|A|A|393
7MT3|1|A|U|394
7MT3|1|A|G|395

Current chains

Chain A

23S rRNA

Nearby chains

Chain U

50S ribosomal protein L24