HL_7N1P_038

3D structure

PDB id

7N1P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

GAAACAUC

Length

8 nucleotides

Bulged bases

7N1P|1|23|A|196

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7N1P_038 not in the Motif Atlas

Geometric match to HL_5J7L_139

Geometric discrepancy: 0.065

The information below is about HL_5J7L_139

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_30068.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

15

Unit IDs

7N1P|1|23|G|194
7N1P|1|23|A|195
7N1P|1|23|A|196
7N1P|1|23|A|197
7N1P|1|23|C|198
7N1P|1|23|A|199
7N1P|1|23|U|200
7N1P|1|23|C|201

Current chains

Chain 23

23S rRNA

Nearby chains

Chain LO

50S ribosomal protein L15

Chain Lb

50S ribosomal protein L28