HL_7N1P_045

3D structure

PDB id

7N1P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

GGACCAUC

Length

8 nucleotides

Bulged bases

7N1P|1|23|G|411

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7N1P_045 not in the Motif Atlas

Homologous match to HL_5J7L_146

Geometric discrepancy: 0.0567

The information below is about HL_5J7L_146

Detailed Annotation

Pseudoknot geometry

Broad Annotation

No text annotation

Motif group

HL_30680.3

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

15

Unit IDs

7N1P|1|23|G|410
7N1P|1|23|G|411
7N1P|1|23|A|412
7N1P|1|23|C|413
7N1P|1|23|C|414
7N1P|1|23|A|415
7N1P|1|23|U|416
7N1P|1|23|C|417

Current chains

Chain 23

23S rRNA

Nearby chains

Chain LO

50S ribosomal protein L15