HL_7N1P_107

3D structure

PDB id

7N1P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

CAG(H2U)(H2U)GG(H2U)AG

Length

10 nucleotides

Bulged bases

7N1P|1|Pt|G|18, 7N1P|1|Pt|G|19

QA status

Modified nucleotides: H2U

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7N1P_107 not in the Motif Atlas

Homologous match to HL_3KFU_004

Geometric discrepancy: 0.1575

The information below is about HL_3KFU_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7N1P|1|Pt|C|13
7N1P|1|Pt|A|14
7N1P|1|Pt|G|15
7N1P|1|Pt|H2U|16
7N1P|1|Pt|H2U|17
7N1P|1|Pt|G|18
7N1P|1|Pt|G|19
7N1P|1|Pt|H2U|20
7N1P|1|Pt|A|21
7N1P|1|Pt|G|22

Current chains

Chain Pt

tRNA

Nearby chains

Chain 23

Large subunit ribosomal RNA; LSU rRNA

Chain Dt

Transfer RNA; tRNA