HL_7N2U_100

3D structure

PDB id

7N2U (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a hybrid-H1 pre-translocation (PRE-H1) conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.53 Å

Loop

Sequence

GAAGACGAC

Length

9 nucleotides

Bulged bases

7N2U|1|23|A|2820

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7N2U_100 not in the Motif Atlas

Homologous match to HL_5J7L_201

Geometric discrepancy: 0.0666

The information below is about HL_5J7L_201

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_64690.6

Basepair signature

cWW-cSW-F-F-F-F

Number of instances in this motif group

9

Unit IDs

7N2U|1|23|G|2819
7N2U|1|23|A|2820
7N2U|1|23|A|2821
7N2U|1|23|G|2822
7N2U|1|23|A|2823
7N2U|1|23|C|2824
7N2U|1|23|G|2825
7N2U|1|23|A|2826
7N2U|1|23|C|2827

Current chains

Chain 23

23S rRNA

Nearby chains

Chain LC

50S ribosomal protein L3

Chain LQ

50S ribosomal protein L17