HL_7N2U_106
3D structure
- PDB id
- 7N2U (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongating 70S ribosome complex in a hybrid-H1 pre-translocation (PRE-H1) conformation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.53 Å
Loop
- Sequence
- GU(PSU)CGAUCC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7N2U_106 not in the Motif Atlas
- Homologous match to HL_4RDX_003
- Geometric discrepancy: 0.22
- The information below is about HL_4RDX_003
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_28252.9
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 141
Unit IDs
7N2U|1|Dt|G|53
7N2U|1|Dt|U|54
7N2U|1|Dt|PSU|55
7N2U|1|Dt|C|56
7N2U|1|Dt|G|57
7N2U|1|Dt|A|58
7N2U|1|Dt|U|59
7N2U|1|Dt|C|60
7N2U|1|Dt|C|61
Current chains
- Chain Dt
- tRNA
Nearby chains
- Chain 23
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: