HL_7N2V_012

3D structure

PDB id

7N2V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a spectinomycin-stalled intermediate state of translocation bound to EF-G in an active, GTP conformation (INT1)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.54 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

7N2V|1|16|U|467

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7N2V_012 not in the Motif Atlas

Homologous match to HL_5J7L_012

Geometric discrepancy: 0.125

The information below is about HL_5J7L_012

Detailed Annotation

GNRA wlth extra near cWW

Broad Annotation

GNRA wlth extra near cWW

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

7N2V|1|16|G|462
7N2V|1|16|U|463
7N2V|1|16|U|464
7N2V|1|16|A|465
7N2V|1|16|A|466
7N2V|1|16|U|467
7N2V|1|16|A|468
7N2V|1|16|C|469
7N2V|1|16|C|470

Current chains

Chain 16

16S rRNA

Nearby chains