HL_7N2V_026

3D structure

PDB id

7N2V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a spectinomycin-stalled intermediate state of translocation bound to EF-G in an active, GTP conformation (INT1)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.54 Å

Loop

Sequence

GUCCGGC

Length

7 nucleotides

Bulged bases

7N2V|1|16|C|1136, 7N2V|1|16|G|1139

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7N2V_026 not in the Motif Atlas

Homologous match to HL_6CZR_097

Geometric discrepancy: 0.2537

The information below is about HL_6CZR_097

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7N2V|1|16|G|1134
7N2V|1|16|U|1135
7N2V|1|16|C|1136
7N2V|1|16|C|1137
7N2V|1|16|G|1138
7N2V|1|16|G|1139
7N2V|1|16|C|1140

Current chains

Chain 16

16S rRNA

Nearby chains

Chain SI

30S ribosomal protein S9