HL_7N2V_036

3D structure

PDB id

7N2V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a spectinomycin-stalled intermediate state of translocation bound to EF-G in an active, GTP conformation (INT1)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.54 Å

Loop

Sequence

UUUCGA

Length

6 nucleotides

Bulged bases

7N2V|1|23|U|139

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7N2V_036 not in the Motif Atlas

Geometric match to HL_4AY2_001

Geometric discrepancy: 0.2354

The information below is about HL_4AY2_001

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.2

Basepair signature

cWW-tSW-F

Number of instances in this motif group

60

Unit IDs

7N2V|1|23|U|137
7N2V|1|23|U|138
7N2V|1|23|U|139
7N2V|1|23|C|140
7N2V|1|23|G|141
7N2V|1|23|A|142

Current chains

Chain 23

23S rRNA

Nearby chains

Chain LW

50S ribosomal protein L23