HL_7N2V_042

3D structure

PDB id

7N2V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a spectinomycin-stalled intermediate state of translocation bound to EF-G in an active, GTP conformation (INT1)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.54 Å

Loop

Sequence

GAUAC

Length

5 nucleotides

Bulged bases

7N2V|1|23|U|321, 7N2V|1|23|A|322

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7N2V_042 not in the Motif Atlas

Homologous match to HL_7RQB_011

Geometric discrepancy: 0.1006

The information below is about HL_7RQB_011

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_70546.1

Basepair signature

cWW-F

Number of instances in this motif group

18

Unit IDs

7N2V|1|23|G|319
7N2V|1|23|A|320
7N2V|1|23|U|321
7N2V|1|23|A|322
7N2V|1|23|C|323

Current chains

Chain 23

23S rRNA

Nearby chains

Chain LD

50S ribosomal protein L4