HL_7N2V_079

3D structure

PDB id

7N2V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a spectinomycin-stalled intermediate state of translocation bound to EF-G in an active, GTP conformation (INT1)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.54 Å

Loop

Sequence

CGCAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7N2V_079 not in the Motif Atlas

Geometric match to HL_6AZ4_001

Geometric discrepancy: 0.2228

The information below is about HL_6AZ4_001

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

397

Unit IDs

7N2V|1|23|C|1868
7N2V|1|23|G|1869
7N2V|1|23|C|1870
7N2V|1|23|A|1871
7N2V|1|23|A|1872
7N2V|1|23|G|1873

Current chains

Chain 23

23S rRNA

Nearby chains