HL_7N2V_083

3D structure

PDB id

7N2V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a spectinomycin-stalled intermediate state of translocation bound to EF-G in an active, GTP conformation (INT1)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.54 Å

Loop

Sequence

CGCCAG

Length

6 nucleotides

Bulged bases

7N2V|1|23|C|2145

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7N2V_083 not in the Motif Atlas

Homologous match to HL_3U4M_001

Geometric discrepancy: 0.1932

The information below is about HL_3U4M_001

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.2

Basepair signature

cWW-tSW-F

Number of instances in this motif group

60

Unit IDs

7N2V|1|23|C|2143
7N2V|1|23|G|2144
7N2V|1|23|C|2145
7N2V|1|23|C|2146
7N2V|1|23|A|2147
7N2V|1|23|G|2148

Current chains

Chain 23

23S rRNA

Nearby chains

Chain SG

30S ribosomal protein S7