HL_7N2V_105
3D structure
- PDB id
- 7N2V (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongating 70S ribosome complex in a spectinomycin-stalled intermediate state of translocation bound to EF-G in an active, GTP conformation (INT1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.54 Å
Loop
- Sequence
- GA(PSU)UGAA(MIA)A(PSU)C
- Length
- 11 nucleotides
- Bulged bases
- 7N2V|1|Dt|U|33, 7N2V|1|Dt|A|38
- QA status
- Modified nucleotides: PSU, MIA
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7N2V_105 not in the Motif Atlas
- Homologous match to HL_5EL4_222
- Geometric discrepancy: 0.2673
- The information below is about HL_5EL4_222
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7N2V|1|Dt|G|30
7N2V|1|Dt|A|31
7N2V|1|Dt|PSU|32
7N2V|1|Dt|U|33
7N2V|1|Dt|G|34
7N2V|1|Dt|A|35
7N2V|1|Dt|A|36
7N2V|1|Dt|MIA|37
7N2V|1|Dt|A|38
7N2V|1|Dt|PSU|39
7N2V|1|Dt|C|40
Current chains
- Chain Dt
- tRNA
Nearby chains
- Chain 16
- Small subunit ribosomal RNA; SSU rRNA
- Chain Pt
- Transfer RNA; tRNA
- Chain SI
- 30S ribosomal protein S9
- Chain mR
- mRNA
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