HL_7N30_011

3D structure

PDB id

7N30 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a hybrid-H2* pre-translocation (PRE-H2*) conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.66 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

7N30|1|16|U|467

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7N30_011 not in the Motif Atlas

Homologous match to HL_5J7L_012

Geometric discrepancy: 0.1423

The information below is about HL_5J7L_012

Detailed Annotation

GNRA wlth extra near cWW

Broad Annotation

GNRA wlth extra near cWW

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

7N30|1|16|G|462
7N30|1|16|U|463
7N30|1|16|U|464
7N30|1|16|A|465
7N30|1|16|A|466
7N30|1|16|U|467
7N30|1|16|A|468
7N30|1|16|C|469
7N30|1|16|C|470

Current chains

Chain 16

16S rRNA

Nearby chains