3D structure

PDB id
7N30 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Elongating 70S ribosome complex in a hybrid-H2* pre-translocation (PRE-H2*) conformation
Experimental method
ELECTRON MICROSCOPY
Resolution
2.66 Å

Loop

Sequence
G(PSU)GCUAACGU
Length
10 nucleotides
Bulged bases
7N30|1|23|U|958, 7N30|1|23|C|961
QA status
Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7N30_057 not in the Motif Atlas
Homologous match to HL_5J7L_159
Geometric discrepancy: 0.0641
The information below is about HL_5J7L_159
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7N30|1|23|G|954
7N30|1|23|PSU|955
7N30|1|23|G|956
7N30|1|23|C|957
7N30|1|23|U|958
7N30|1|23|A|959
7N30|1|23|A|960
7N30|1|23|C|961
7N30|1|23|G|962
7N30|1|23|U|963

Current chains

Chain 23
23S rRNA

Nearby chains

Chain 5
5S ribosomal RNA; 5S rRNA
Chain LP
50S ribosomal protein L16

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.1317 s