HL_7N30_103
3D structure
- PDB id
- 7N30 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongating 70S ribosome complex in a hybrid-H2* pre-translocation (PRE-H2*) conformation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.66 Å
Loop
- Sequence
- CAGUUGGGAG
- Length
- 10 nucleotides
- Bulged bases
- 7N30|1|Dt|U|16, 7N30|1|Dt|U|17, 7N30|1|Dt|G|18, 7N30|1|Dt|G|19, 7N30|1|Dt|G|20
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7N30_103 not in the Motif Atlas
- Homologous match to HL_1QF6_001
- Geometric discrepancy: 0.1472
- The information below is about HL_1QF6_001
- Detailed Annotation
- tRNA D-loop
- Broad Annotation
- No text annotation
- Motif group
- HL_20490.1
- Basepair signature
- cWW-cWS-F
- Number of instances in this motif group
- 13
Unit IDs
7N30|1|Dt|C|13
7N30|1|Dt|A|14
7N30|1|Dt|G|15
7N30|1|Dt|U|16
7N30|1|Dt|U|17
7N30|1|Dt|G|18
7N30|1|Dt|G|19
7N30|1|Dt|G|20
7N30|1|Dt|A|21
7N30|1|Dt|G|22
Current chains
- Chain Dt
- tRNA
Nearby chains
- Chain 23
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: