HL_7N30_104

3D structure

PDB id

7N30 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a hybrid-H2* pre-translocation (PRE-H2*) conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.66 Å

Loop

Sequence

GA(PSU)UGAA(MIA)A(PSU)C

Length

11 nucleotides

Bulged bases

7N30|1|Dt|A|38

QA status

Modified nucleotides: PSU, MIA

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7N30_104 not in the Motif Atlas

Homologous match to HL_5EL4_222

Geometric discrepancy: 0.292

The information below is about HL_5EL4_222

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7N30|1|Dt|G|30
7N30|1|Dt|A|31
7N30|1|Dt|PSU|32
7N30|1|Dt|U|33
7N30|1|Dt|G|34
7N30|1|Dt|A|35
7N30|1|Dt|A|36
7N30|1|Dt|MIA|37
7N30|1|Dt|A|38
7N30|1|Dt|PSU|39
7N30|1|Dt|C|40

Current chains

Chain Dt

tRNA

Nearby chains

Chain 16

Small subunit ribosomal RNA; SSU rRNA

Chain SI

30S ribosomal protein S9

Chain mR

mRNA