3D structure

PDB id
7N31 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Elongating 70S ribosome complex in a post-translocation (POST) conformation
Experimental method
ELECTRON MICROSCOPY
Resolution
2.69 Å

Loop

Sequence
UUUUGUAUAA
Length
10 nucleotides
Bulged bases
7N31|1|23|A|574
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7N31_049 not in the Motif Atlas
Homologous match to HL_5J7L_150
Geometric discrepancy: 0.0563
The information below is about HL_5J7L_150
Detailed Annotation
T-loop with 2 stacked bulged bases
Broad Annotation
T-loop
Motif group
HL_28252.9
Basepair signature
cWW-tWH-F-F-F-F-F
Number of instances in this motif group
141

Unit IDs

7N31|1|23|U|566
7N31|1|23|U|567
7N31|1|23|U|568
7N31|1|23|U|569
7N31|1|23|G|570
7N31|1|23|U|571
7N31|1|23|A|572
7N31|1|23|U|573
7N31|1|23|A|574
7N31|1|23|A|575

Current chains

Chain 23
23S rRNA

Nearby chains

Chain LC
50S ribosomal protein L3
Chain LO
50S ribosomal protein L15
Chain LT
50S ribosomal protein L20
Chain LU
50S ribosomal protein L21
Chain Lf
50S ribosomal protein L32

Coloring options:


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