HL_7N31_114

3D structure

PDB id

7N31 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a post-translocation (POST) conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.69 Å

Loop

Sequence

ACU(U8U)UU(T6A)A(PSU)

Length

9 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: U8U, T6A, PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7N31_114 not in the Motif Atlas

Homologous match to HL_1FIR_005

Geometric discrepancy: 0.1531

The information below is about HL_1FIR_005

Detailed Annotation

tRNA anticodon loop

Broad Annotation

Anticodon loop

Motif group

HL_06059.7

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

51

Unit IDs

7N31|1|Pt|A|31
7N31|1|Pt|C|32
7N31|1|Pt|U|33
7N31|1|Pt|U8U|34
7N31|1|Pt|U|35
7N31|1|Pt|U|36
7N31|1|Pt|T6A|37
7N31|1|Pt|A|38
7N31|1|Pt|PSU|39

Current chains

Chain Pt

tRNA

Nearby chains

Chain 16

Small subunit ribosomal RNA; SSU rRNA

Chain Dt

Transfer RNA; tRNA

Chain SI

30S ribosomal protein S9

Chain mR

mRNA