HL_7N3O_006

3D structure

PDB id

7N3O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Cas12k-sgRNA complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CGAUCAAG

Length

8 nucleotides

Bulged bases

7N3O|1|B|C|203, 7N3O|1|B|A|205

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7N3O|1|B|C|199
7N3O|1|B|G|200
7N3O|1|B|A|201
7N3O|1|B|U|202
7N3O|1|B|C|203
7N3O|1|B|A|204
7N3O|1|B|A|205
7N3O|1|B|G|206

Current chains

Chain B

Single guide RNA

Nearby chains

Chain A

Cas12k