HL_7N8B_013

3D structure

PDB id

7N8B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cycloheximide bound vacant 80S structure isolated from cbf5-D95A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.05 Å

Loop

Sequence

CGUAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7N8B_013 not in the Motif Atlas

Homologous match to HL_8C3A_013

Geometric discrepancy: 0.5772

The information below is about HL_8C3A_013

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_23696.1

Basepair signature

cWW-F-F

Number of instances in this motif group

8

Unit IDs

7N8B|1|A1|C|599
7N8B|1|A1|G|600
7N8B|1|A1|U|601
7N8B|1|A1|A|602
7N8B|1|A1|A|603
7N8B|1|A1|G|604

Current chains

Chain A1

25S

Nearby chains

Chain AC

60S ribosomal protein L4-A

Chain AF

60S ribosomal protein L7-A