HL_7N8B_117

3D structure

PDB id

7N8B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cycloheximide bound vacant 80S structure isolated from cbf5-D95A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.05 Å

Loop

Sequence

UACUUAAUUGA

Length

11 nucleotides

Bulged bases

7N8B|1|A1|A|1075

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7N8B|1|A1|U|1074
7N8B|1|A1|A|1075
7N8B|1|A1|C|1076
7N8B|1|A1|U|1077
7N8B|1|A1|U|1078
7N8B|1|A1|A|1079
7N8B|1|A1|A|1080
7N8B|1|A1|U|1081
7N8B|1|A1|U|1082
7N8B|1|A1|G|1083
7N8B|1|A1|A|1084

Current chains

Chain A1

25S

Nearby chains

Chain AD

60S ribosomal protein L5

Chain AT

60S ribosomal protein L21-A

Chain Ab

60S ribosomal protein L29