HL_7NAT_008

3D structure

PDB id

7NAT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacterial 30S ribosomal subunit assembly complex state A (Consensus refinement)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.59 Å

Loop

Sequence

AACUGAGACACGGU

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NAT_008 not in the Motif Atlas

Homologous match to HL_4LFB_008

Geometric discrepancy: 0.0914

The information below is about HL_4LFB_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81205.3

Basepair signature

cWW-cWW-tWH-F-tWH-F-F-F-F-F

Number of instances in this motif group

2

Unit IDs

7NAT|1|A|A|320
7NAT|1|A|A|321
7NAT|1|A|C|322
7NAT|1|A|U|323
7NAT|1|A|G|324
7NAT|1|A|A|325
7NAT|1|A|G|326
7NAT|1|A|A|327
7NAT|1|A|C|328
7NAT|1|A|A|329
7NAT|1|A|C|330
7NAT|1|A|G|331
7NAT|1|A|G|332
7NAT|1|A|U|333

Current chains

Chain A

16S rRNA

Nearby chains

Chain P

30S ribosomal protein S16

Chain T

30S ribosomal protein S20