HL_7NAU_017

3D structure

PDB id

7NAU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacterial 30S ribosomal subunit assembly complex state C (Consensus Refinement)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.78 Å

Loop

Sequence

GAUUAGAUACC

Length

11 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NAU_017 not in the Motif Atlas

Geometric match to HL_1J1U_002

Geometric discrepancy: 0.3732

The information below is about HL_1J1U_002

Detailed Annotation

tRNA anticodon loop

Broad Annotation

Anticodon loop

Motif group

HL_11974.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

17

Unit IDs

7NAU|1|A|G|786
7NAU|1|A|A|787
7NAU|1|A|U|788
7NAU|1|A|U|789
7NAU|1|A|A|790
7NAU|1|A|G|791
7NAU|1|A|A|792
7NAU|1|A|U|793
7NAU|1|A|A|794
7NAU|1|A|C|795
7NAU|1|A|C|796

Current chains

Chain A

16S rRNA

Nearby chains

Chain K

30S ribosomal protein S11