3D structure

PDB id
7NAV (explore in PDB, NAKB, or RNA 3D Hub)
Description
Bacterial 30S ribosomal subunit assembly complex state D (Consensus refinement)
Experimental method
ELECTRON MICROSCOPY
Resolution
4.8 Å

Loop

Sequence
CUUCGG
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7NAV_005 not in the Motif Atlas
Homologous match to HL_5J7L_005
Geometric discrepancy: 0.5565
The information below is about HL_5J7L_005
Detailed Annotation
UNCG
Broad Annotation
No text annotation
Motif group
HL_34617.5
Basepair signature
cWW-tSW-F
Number of instances in this motif group
57

Unit IDs

7NAV|1|A|C|207
7NAV|1|A|U|208
7NAV|1|A|U|209
7NAV|1|A|C|210
7NAV|1|A|G|211
7NAV|1|A|G|212

Current chains

Chain A
16S rRNA

Nearby chains

No other chains within 10Å

Coloring options:


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