HL_7NAV_013

3D structure

PDB id

7NAV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacterial 30S ribosomal subunit assembly complex state D (Consensus refinement)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.8 Å

Loop

Sequence

GCAGCC(G7M)C

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NAV_013 not in the Motif Atlas

Geometric match to HL_1WZ2_007

Geometric discrepancy: 0.2311

The information below is about HL_1WZ2_007

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.7

Basepair signature

cWW-F

Number of instances in this motif group

22

Unit IDs

7NAV|1|A|G|521
7NAV|1|A|C|522
7NAV|1|A|A|523
7NAV|1|A|G|524
7NAV|1|A|C|525
7NAV|1|A|C|526
7NAV|1|A|G7M|527
7NAV|1|A|C|528

Current chains

Chain A

16S rRNA

Nearby chains

Chain L

30S ribosomal protein S12

Chain X

Ribosome maturation factor RimP