HL_7NAV_027

3D structure

PDB id

7NAV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacterial 30S ribosomal subunit assembly complex state D (Consensus refinement)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.8 Å

Loop

Sequence

UGAUAAA

Length

7 nucleotides

Bulged bases

7NAV|1|A|U|1168

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NAV_027 not in the Motif Atlas

Homologous match to HL_5J7L_026

Geometric discrepancy: 0.3527

The information below is about HL_5J7L_026

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_93535.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

6

Unit IDs

7NAV|1|A|U|1165
7NAV|1|A|G|1166
7NAV|1|A|A|1167
7NAV|1|A|U|1168
7NAV|1|A|A|1169
7NAV|1|A|A|1170
7NAV|1|A|A|1171

Current chains

Chain A

16S rRNA

Nearby chains

Chain B

30S ribosomal protein S2