HL_7NBU_032
3D structure
- PDB id
- 7NBU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the HigB1 toxin mutant K95A from Mycobacterium tuberculosis (Rv1955) and its target, the cspA mRNA, on the E. coli Ribosome.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.11 Å
Loop
- Sequence
- G(2MG)G(MA6)(MA6)C
- Length
- 6 nucleotides
- Bulged bases
- 7NBU|1|A|G|1517
- QA status
- Modified nucleotides: 2MG, MA6
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7NBU_032 not in the Motif Atlas
- Homologous match to HL_6CZR_103
- Geometric discrepancy: 0.1154
- The information below is about HL_6CZR_103
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_37824.6
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 360
Unit IDs
7NBU|1|A|G|1515
7NBU|1|A|2MG|1516
7NBU|1|A|G|1517
7NBU|1|A|MA6|1518
7NBU|1|A|MA6|1519
7NBU|1|A|C|1520
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain a
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: