Loop HL_7NBU

3D structure

PDB id: 7NBU (explore in PDB, NAKB, or RNA 3D Hub)
Description: Structure of the HigB1 toxin mutant K95A from Mycobacterium tuberculosis (Rv1955) and its target, the cspA mRNA, on the E. coli Ribosome.
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.11 Å

Loop

Sequence: CAGGAUGUUGGCUUAGAAGCAGCCAUCAUUUAAAGAAAGCGUAAUAGCUCACUG
Length: 54 nucleotides
Bulged bases: 7NBU|1|a|U|1061
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

7NBU|1|a|C|1053
7NBU|1|a|A|1054
7NBU|1|a|G|1055
7NBU|1|a|G|1056
7NBU|1|a|A|1057
7NBU|1|a|U|1058
7NBU|1|a|G|1059
7NBU|1|a|U|1060
7NBU|1|a|U|1061
7NBU|1|a|G|1062
7NBU|1|a|G|1063
7NBU|1|a|C|1064
7NBU|1|a|U|1065
7NBU|1|a|U|1066
7NBU|1|a|A|1067
7NBU|1|a|G|1068
7NBU|1|a|A|1069
7NBU|1|a|A|1070
7NBU|1|a|G|1071
7NBU|1|a|C|1072
7NBU|1|a|A|1073
7NBU|1|a|G|1074
7NBU|1|a|C|1075
7NBU|1|a|C|1076
7NBU|1|a|A|1077
7NBU|1|a|U|1078
7NBU|1|a|C|1079
7NBU|1|a|A|1080
7NBU|1|a|U|1081
7NBU|1|a|U|1082
7NBU|1|a|U|1083
7NBU|1|a|A|1084
7NBU|1|a|A|1085
7NBU|1|a|A|1086
7NBU|1|a|G|1087
7NBU|1|a|A|1088
7NBU|1|a|A|1089
7NBU|1|a|A|1090
7NBU|1|a|G|1091
7NBU|1|a|C|1092
7NBU|1|a|G|1093
7NBU|1|a|U|1094
7NBU|1|a|A|1095
7NBU|1|a|A|1096
7NBU|1|a|U|1097
7NBU|1|a|A|1098
7NBU|1|a|G|1099
7NBU|1|a|C|1100
7NBU|1|a|U|1101
7NBU|1|a|C|1102
7NBU|1|a|A|1103
7NBU|1|a|C|1104
7NBU|1|a|U|1105
7NBU|1|a|G|1106

Current chains

Chain a: 23S ribosomal RNA

Nearby chains

Chain 3: 50S ribosomal protein L36
Chain g: 50S ribosomal protein L6
Chain l: 50S ribosomal protein L16

HL_7NBU_062