HL_7NBU_076

3D structure

PDB id

7NBU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the HigB1 toxin mutant K95A from Mycobacterium tuberculosis (Rv1955) and its target, the cspA mRNA, on the E. coli Ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.11 Å

Loop

Sequence

ACUUGCU

Length

7 nucleotides

Bulged bases

7NBU|1|a|U|1729, 7NBU|1|a|C|1732

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NBU_076 not in the Motif Atlas

Geometric match to HL_5J7L_018

Geometric discrepancy: 0.3921

The information below is about HL_5J7L_018

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_37344.1

Basepair signature

cWW-F-F

Number of instances in this motif group

2

Unit IDs

7NBU|1|a|A|1727
7NBU|1|a|C|1728
7NBU|1|a|U|1729
7NBU|1|a|U|1730
7NBU|1|a|G|1731
7NBU|1|a|C|1732
7NBU|1|a|U|1733

Current chains

Chain a

23S ribosomal RNA

Nearby chains